This investigation focuses on nonlinear solvers for the Bidomain model, a nonlinear system of parabolic reaction-diffusion equations describing the bioelectrical activity of the myocardium. Staggered fully implicit time discretizations of the Bidomain finite element semi-discrete problem lead to nonlinear algebraic systems to be solved at each time step. This work compares several nonlinear solvers, such as inexact-Newton, quasi-Newton and nonlinear Generalized Minimal Residual methods, for the solution of these nonlinear systems. Parallel experiments show strong scalability and robustness of the resulting solver with respect to the number of degrees of freedom of the discrete problem. These preliminary results pave the way for further studies of nonlinear solvers for cardiac electrophysiology models that can attain better parallel efficiency than the standard Newton method.

Parallel nonlinear solvers in computational cardiac electrophysiology

Barnafi N. A.;Huynh N. M. M.;Pavarino L. F.;Scacchi S.
2022-01-01

Abstract

This investigation focuses on nonlinear solvers for the Bidomain model, a nonlinear system of parabolic reaction-diffusion equations describing the bioelectrical activity of the myocardium. Staggered fully implicit time discretizations of the Bidomain finite element semi-discrete problem lead to nonlinear algebraic systems to be solved at each time step. This work compares several nonlinear solvers, such as inexact-Newton, quasi-Newton and nonlinear Generalized Minimal Residual methods, for the solution of these nonlinear systems. Parallel experiments show strong scalability and robustness of the resulting solver with respect to the number of degrees of freedom of the discrete problem. These preliminary results pave the way for further studies of nonlinear solvers for cardiac electrophysiology models that can attain better parallel efficiency than the standard Newton method.
2022
IFAC-PapersOnLine
Inglese
10th Vienna International Conference on Mathematical Modelling, MATHMOD 2022
2022
aut
55
187
192
6
Elsevier B.V.
Bidomain model; implicit time discretization; nonlinear solver; nonlinear system; parallel computing
no
none
Barnafi, N. A.; Huynh, N. M. M.; Pavarino, L. F.; Scacchi, S.
273
info:eu-repo/semantics/conferenceObject
4
4 Contributo in Atti di Convegno (Proceeding)::4.1 Contributo in Atti di convegno
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11571/1487918
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