Due to the increasing number of available biomedical data repositories, providing a comprehensive and intuitive access to information is still a demanding task for Information Retrieval systems. In this work we present an interactive data exploration system that retrieves relevant information by propagating the user's interest within a network. The developed techniques have been applied to two different retrieval tasks useful for biomedical research: the prioritization of proteins related to a disease of interest and the search of publications in the literature. The method relies on a network of biomedical entities, scoring of entities of interest by the user, and score propagation. The assessment of the relevance of the retrieved information confirmed a high accuracy of the presented algorithms for both the domains considered.

Interest propagation for knowledge extraction and representation.

MULAS, FRANCESCA;ZUPAN, BLAZ;BELLAZZI, RICCARDO
2013-01-01

Abstract

Due to the increasing number of available biomedical data repositories, providing a comprehensive and intuitive access to information is still a demanding task for Information Retrieval systems. In this work we present an interactive data exploration system that retrieves relevant information by propagating the user's interest within a network. The developed techniques have been applied to two different retrieval tasks useful for biomedical research: the prioritization of proteins related to a disease of interest and the search of publications in the literature. The method relies on a network of biomedical entities, scoring of entities of interest by the user, and score propagation. The assessment of the relevance of the retrieved information confirmed a high accuracy of the presented algorithms for both the domains considered.
2013
STUDIES IN HEALTH TECHNOLOGY AND INFORMATICS
Computer Science & Engineering includes resources on computer hardware and architecture, computer software, software engineering and design, computer graphics, programming languages, theoretical computing, computing methodologies, broad computing topics, and interdisciplinary computer applications.
Comitato scientifico
Inglese
MIE 2013
Internazionale
ELETTRONICO
182
186
5
Bioinformatics
none
Mulas, Francesca; del Fabbro, E; Zupan, Blaz; Bellazzi, Riccardo
273
info:eu-repo/semantics/conferenceObject
4
4 Contributo in Atti di Convegno (Proceeding)::4.1 Contributo in Atti di convegno
File in questo prodotto:
Non ci sono file associati a questo prodotto.

I documenti in IRIS sono protetti da copyright e tutti i diritti sono riservati, salvo diversa indicazione.

Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/11571/804834
Citazioni
  • ???jsp.display-item.citation.pmc??? ND
  • Scopus 1
  • ???jsp.display-item.citation.isi??? 2
social impact